ABOUT THIS RECORDspecies: Canis lupus familiaris
miRNA family: let-7
source: miRNEST
Taxonomy by NCBI:
Canis lupus familiaris Canis lupus Canis Canidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACTATACAACCTACTGCCTT miRNA* GGTAGTAGGTTGTGTGGTTTC mismatches: 0 bulges: 0 |
pre-miRNA
CCCGGGCACCGGCGGGGTGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTTGCCCCCTCGGAAGATAACTATACAACCTACTGCCTTCCCCGAGGA
GCCCAGCGAC
dot-bracket secondary structure
...((((.((..(((((.(((((((((((((((((((((...((((((.....))))))..((....)).)))))))))))))))))))))))))).)).
))))......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CCCGGGCACCGGCGGGGTGAGGTAGTAGGTTGTGTGGTTTCAGGGCAGTGATGTTGCCCCCTCGGAAGATAACTATACAACCTACTGCCTTCCCCGAGGA
GCCCAGCGAC
dot-bracket secondary structure
...((((.((..(((((.(((((((((((((((((((((...((((((.....))))))..((....)).)))))))))))))))))))))))))).)).
))))......
SIMILARITIES| miRBase bta-let-7b: 3e-38 PMRD no hits microPC no hits | UniProt no hits RFAM let-7: 3e-29 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
