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ABOUT THIS RECORD

ID: MNEST006977
species: Physcomitrella patens
miRNA family: MIR319
source: miRNEST

Taxonomy by NCBI:
Physcomitrella patens Physcomitrella Funariaceae Funariales Funariidae Bryopsida Moss Superclass V Bryophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGACTGAAGGGAGCTCCAC

miRNA*
GGAGCTCCGTTTTCGGTCCAATA

mismatches: 0
bulges: 2

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pre-miRNA
ACCTTGATTGTGGAGCTCCGTTTTCGGTCCAATAGTGGCTGCGACGGAAGGTGGTCCCGCTGCCGAATCACACGTCCGGGTTCTTTATCGGGGGCAGGGC
CCCGATACGGTATCCGAACGTTTGTCCCGGGAACTGGTCGACCTTCCGCCCGGCGTCTCTTGGACTGAAGGGAGCTCCACTCTTGGCG


dot-bracket secondary structure
.((..((..((((((((((..(((((((((((.((..((((...(((((((((((((((.........((.((((.(((((.((.((((((((......)
))))))).)).))))).)))).))...)))).))).....))))))))..))))..)).)))))))))))))))))))))))..))..



SIMILARITIES
miRBase ppt-MIR319a: 1e-79

PMRD ppt-miR319a: 1e-79

microPC miR319: 0.0001
UniProt no hits

RFAM MIR159: 0.0002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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