ABOUT THIS RECORDspecies: Branchiostoma floridae
miRNA family: mir-184
source: miRNEST
Taxonomy by NCBI:
Branchiostoma floridae Branchiostoma Branchiostomidae Cephalochordata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGACGGAGAACTGATAAGGG miRNA* CTTATCACTTCTTCCGCCGAG mismatches: 1 bulges: 2 |
pre-miRNA
CTCCTGGTTCTGCACGCTCCCTTATCACTTCTTCCGCCGAGCTCGTGTCTCTGAGTCAGCTGGACGGAGAACTGATAAGGGCCCGTGCCGAACACCAA
dot-bracket secondary structure
......((((.(((((..(((((((((.((((.((((((.(((((......)))))....))).))))))).)))))))))..))))).)))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTCCTGGTTCTGCACGCTCCCTTATCACTTCTTCCGCCGAGCTCGTGTCTCTGAGTCAGCTGGACGGAGAACTGATAAGGGCCCGTGCCGAACACCAA
dot-bracket secondary structure
......((((.(((((..(((((((((.((((.((((((.(((((......)))))....))).))))))).)))))))))..))))).)))).....
SIMILARITIES| miRBase bfl-mir-184: 8e-51 PMRD no hits microPC no hits | UniProt no hits RFAM mir-184: 8e-42 | most similar mature miRNAs |
Identical with: bfl-mir-184 from miRBase (MNEST024688) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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