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ABOUT THIS RECORD

ID: MNEST007295
species: Pimephales promelas
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Pimephales promelas Pimephales Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GATGCTGCTGCTGCTGCTGCG

miRNA*
CAGGAGGAGGCAAAGCGTCTA

mismatches: 4
bulges: 2

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pre-miRNA
CGCGCCCGGGTGATGCTGCTGCTGCTGCTGCGGGTCGCCACGACACCGTCAAGGGCGGAGGAGCAGGAGGAGGCAAAGCGTCTACTGTAGTG

dot-bracket secondary structure
.((...(((..((((((..((((.((.((((...(((((..(((...)))...)))))....))))..)).)))).))))))..)))..)).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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