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ABOUT THIS RECORD

ID: MNEST007298
species: Pimephales promelas
miRNA family: miR-1603
source: miRNEST

Taxonomy by NCBI:
Pimephales promelas Pimephales Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGTTTGTTTTGTGTTCTTG

miRNA*
AGCCTATAATGCAATATAA

mismatches: 4
bulges: 2

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pre-miRNA
CCGAGGTACTAGGTTGTATTCAAGCCTATAATGCAATATAATATTAAACCATATGCTTTCGCATTAATGCAGCAGATGAATGCCTTTCTGAGAGCTGAGG
CGTGCACCGCAGAGGTTTACAGGTGGTCATTAAATTATGCGCTTTGGTTTTTGTTGTTGTTTGTTTTGTGTTCTTGTAGGAATGGCATTAAGGTT


dot-bracket secondary structure
.........((((((.......))))))....((((.((((((..((((((...((....(((....))).((((((.((((((..((((.(((((...(
((.....)))...))))).)))).)).))))..))).)))))..)))))).))))))...)))).....(((((....))))).((......)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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