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ABOUT THIS RECORD
ID:
MNEST007355
species:
Solanum tuberosum
miRNA family:
MIR838
source:
miRNEST
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTCCTTCTTCTTCTTGCAAG
miRNA*
AAGGTAAAAGAGGAGGGACATC
mismatches:
4
bulges:
1
View larger
pre-miRNA
ACTATCCAACTCACCTCTATT
CTTCCTTCTTCTTCTTGCAAG
CCTTCTAGCA
AAGGTAAAAGAGGAGGGACATC
ATTGGAGGTCATCAACAA
dot-bracket secondary structure
............(((((((..
..(((((((((((.((((..(
(......)).
...)))))))))))))))....
..))))))).........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record