miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST007362
species:
Solanum tuberosum
miRNA family:
miR166g
source:
miRNEST
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGGATGTTGTTTGGCTCGACA
miRNA*
TCGGACCAGGCTTCATTCCTC
mismatches:
4
bulges:
0
View larger
pre-miRNA
ATTGTGTGTGGTGAGTTTGAGG
GGGATGTTGTTTGGCTCGACA
CAATTACTCTCTTGTATGTGTTTATTTATTCGTCATCAAGATTGATGTTGATAACGA
ATAAATTAAACACAACAAGATATGTAAAAAGGGAGTAAAGGCG
TCGGACCAGGCTTCATTCCTC
TCAAACAATATTCTACTTC
dot-bracket secondary structure
.....(((.((((.((((((((
((((((..((((((.(((((.
...((((((((((...(((((((((((((((((.(((((........))))).))))
))))).))))))))(((.....)))...))))))))))....)
)))).))))))..))))))))
))))))..)))).)))...
SIMILARITIES
miRBase
zma-MIR166m
:
0.00000001
PMRD
zma-miR166m
:
0.00000001
microPC
miR166
:
0.0001
UniProt
no hits
RFAM
mir-166: 0.0000002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record