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ABOUT THIS RECORD
ID:
MNEST007364
species:
Solanum tuberosum
miRNA family:
MIR168
source:
miRNEST
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGAC
miRNA*
CCCGCCTTGCATCAACTGAAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
GCCTCTCAT
TCGCTTGGTGCAGGTCGGGAC
CTACCTCGCCGGCACAATGGCGGTAGCTGACGGCGACGCCAGCGTACCGGTAAAAACTAATTTTTTACAT
GTTGTCTGTGGCGTAGTTTGGGT
CCCGCCTTGCATCAACTGAAT
AGGAGA
dot-bracket secondary structure
..((((.((
(((.((((((((((.((((((
((((..(((((..((((((.(((((((((.((....)).)))).)))))(((((((.....))))))).)
)))))...)))))..))..))))
)))).)))))))))).)))))
.)))).
SIMILARITIES
miRBase
ptc-MIR168b
:
0.0000005
PMRD
stu-miR168
:
5e-44
microPC
miR168
:
3e-67
UniProt
no hits
RFAM
MIR168: 0.000009
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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