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ABOUT THIS RECORD

ID: MNEST007387
species: Solanum tuberosum
miRNA family: MIR1030
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTGCATTTGCACCTGCACCT

miRNA*
GTGTTGGTGCTCATGCAGACA

mismatches: 3
bulges: 0

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pre-miRNA
TATTTCTGTAAACAAGAGACATATTTTTATCTGCATTTGCACCTGCACCTTAGTGAACGAATTTGTTAGCATATAATTCGTGCAGAAAGGTGTTGGTGCT
CATGCAGACA
AAAATGGTATCTTGGCCTTCCATTGG


dot-bracket secondary structure
............(((((.((.(((((((.(((((((..(((((.(((((((..((.(((((((...((...)).))))))).))..))))))).))))).
.))))))).)
)))))))).)))))............



SIMILARITIES
miRBase ptc-MIR530a: 0.00000003

PMRD ptc-miRf11026-akr: 0.00000003

microPC miR1030: 0.00003
UniProt no hits

RFAM MIR530: 0.0000005
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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