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ABOUT THIS RECORD

ID: MNEST007392
species: Solanum tuberosum
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AATGGGACGGAGGGAGTACTT

miRNA*
 CTACTCCCTCCGTCCCATTTT

mismatches: 3
bulges: 0
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pre-miRNA
 ATTTATGTATATTCTACTCCCTCCGTCCCATTTTATGTGGCACCATTTCCTTTTTGGTCAGTCCCAAAAAGAATGTCACATTTTCTTATATGGTAAGTAT
TTAAAGGTACAATTCCTCTTTTACCCTTGTTGGTTCCACTTAATCTTAAAGAAAGTATTCCAATACATTTATGAGGAGAGAGAAAAATGAGTCTACTTTT
TAATATGACTATTTTTTGAAGGGACAATTTGGTAAACATTTCAAAGTCTTCATTTATTTCTTAAACTCCGTGCCCGGTCAAATGTTGCCACATAAAATGG
GACGGAGGGAGTACTTAATTTGTTTC

dot-bracket secondary structure
..............((((((((((((((((((((((((((((.(((((.((((((((......))))))))..((((....((((....(((((..((((
(.(((((((..((((.((((((.((..((((((....((((..(((...)))))))...))))))((....)).)).)))))).....)))).)))))))
.))))).))))).....)))).))))(((.((((....................................)))).))).))))).)))))))))))))))
))))))))))))).............


SIMILARITIES
miRBase osa-MIR812h: 0.00007

PMRD osa-miR812h: 0.00007

microPC no hits		UniProt no hits

RFAM MIR1122: 0.00002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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