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ABOUT THIS RECORD

ID: MNEST007393
species: Solanum tuberosum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTACTCCTTCCGTCCGAATTC

miRNA*
ATTGGGACGGAGGGAGTACTT

mismatches: 3
bulges: 0

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pre-miRNA
CTACACCTATTACTCCTTCCGTCCGAATTCAAGTGTCTTCTGAGCACAAAGGTTAAGAAATAAAGGTAAGACTTTTGAATCTTTGTGGTCTTAAATTAGA
GATGCCTAAGAGATACTCTTTTTGGACAAACCAAAAACAGAAGTAAGACATTTAAATTGGGACGGAGGGAGTACTTCTTTTT


dot-bracket secondary structure
..........((((((((((((((.((((.(((((((((((...((((((((((......(((((((...)))))))))))))))))(((((...((((.
.....))))))))).((.(((((((.....))))))).)).)).))))))))).)))).)))))))))))))).........



SIMILARITIES
miRBase no hits

PMRD osa-miRf11270-akr: 0.0001

microPC no hits
UniProt no hits

RFAM MIR1122: 0.0002
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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