miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST007394
species: Solanum tuberosum
miRNA family: miR4249
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGATTTGAGAAGTTGAGGTA

miRNA*
CCTCCACTCATTTAGATCAATG

mismatches: 5
bulges: 1

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pre-miRNA
GATGTTTTGCCGCCTCCACTCATTTAGATCAATGATGTTCATTCCAAATGCCCAACCACAAGCACGAGGATCAAAATTTTTAGAGATCAGAGGATTTGAG
AAGTTGAGGTA
GCGGTCAAA


dot-bracket secondary structure
..((..((((.(((((.(((..((((((((..((((.(((..(((...(((..........)))...)))...((....)).)))))))...))))))))
.))).))))).
)))).))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q93ZX7|GAUT4_ARATH: 1e-16

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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