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ABOUT THIS RECORD

ID: MNEST007398
species: Solanum tuberosum
miRNA family: MIR403
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTAGATTCACGCACAAACTCG

miRNA*
CGTTTGTGCGTGAATCTAACA

mismatches: 4
bulges: 0

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pre-miRNA
AGAAATGGAAAATCAGGAAGAGGCATATTTCACGTTTGTGCGTGAATCTAACAACCCTTTTCATCAGAAAAACTGTTGTTGTTTGCTAGATTCACGCACA
AACTCG
TAATATGTATTTTTCGAATATCTGCGCTT


dot-bracket secondary structure
......(((......((((((.(((((((....((((((((((((((((((((((..(((((....)))))...))))).......))))))))))))))
)))...
.))))))).)))))).....)))......



SIMILARITIES
miRBase tcc-MIR403a: 0.0000004

PMRD stu-miR403: 2e-55

microPC miR403: 1e-35
UniProt no hits

RFAM MIR403: 0.0000005
most similar mature miRNAs

Identical with: stu-miR403 from PMRD (MNEST054669)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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