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ABOUT THIS RECORD

ID: MNEST007409
species: Gadus morhua
miRNA family: mir-133
source: miRNEST

Taxonomy by NCBI:
Gadus morhua Gadus Gadidae Gadiformes Paracanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGCTGGTTGAAGGGGACCAA

miRNA*
GGTTCCATTTTACCAGCTTTA

mismatches: 4
bulges: 0

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pre-miRNA
AAGCATAGCTACAGCTGGTTGAAGGGGACCAAATCCATTCAAGAGGTGATATGGTTCCATTTTACCAGCTTTAGCAAAGCA

dot-bracket secondary structure
..((...((((.(((((((.(((.(((((((.(((...((....)).))).))))))).))).))))))).))))...)).


SIMILARITIES
miRBase dre-mir-133a-1: 5e-36

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-133: 5e-24
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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