ABOUT THIS RECORDspecies: Ixodes scapularis
miRNA family: mir-616
source: miRNEST
Taxonomy by NCBI:
Ixodes scapularis Ixodes Ixodinae Ixodidae Ixodoidea Ixodida Parasitiformes Acari Arachnida Chelicerata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTCATTGGAGGATTTGAGAA miRNA* CTTCGGTTCACCAGCTCGACGGG mismatches: 4 bulges: 2 |
pre-miRNA
GAGGTCTACGAAGTCATTGGAGGATTTGAGAATGAGGGGAAGCAACCTCGCATCTCTCCTCTTTTCTTCGGTTCACCAGCTCGACGGGAAGTAGCG
dot-bracket secondary structure
...(.((((...(((.((((.(((((.(((((.(((((((.((......))...)))))))..))))).))))).))))...))).....))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GAGGTCTACGAAGTCATTGGAGGATTTGAGAATGAGGGGAAGCAACCTCGCATCTCTCCTCTTTTCTTCGGTTCACCAGCTCGACGGGAAGTAGCG
dot-bracket secondary structure
...(.((((...(((.((((.(((((.(((((.(((((((.((......))...)))))))..))))).))))).))))...))).....))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
