ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIR156
source: miRNEST
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGTGAGCACA miRNA* TGCTCACTACTCTTTCTGTCGGT mismatches: 0 bulges: 2 |
pre-miRNA
TGGACAGAAATTGACAGAAGAGAGTGAGCACAAAGAGGCACATGATATAACTCTATATCACTGCTTTTGTGTGCTCACTACTCTTTCTGTCGGTTTTCAG
TG
dot-bracket secondary structure
......((((((((((((((((((((((((((.(((((((..(((((((....))))))).))))))).)))))))))).))).)))))))))))))...
..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGGACAGAAATTGACAGAAGAGAGTGAGCACAAAGAGGCACATGATATAACTCTATATCACTGCTTTTGTGTGCTCACTACTCTTTCTGTCGGTTTTCAG
TG
dot-bracket secondary structure
......((((((((((((((((((((((((((.(((((((..(((((((....))))))).))))))).)))))))))).))).)))))))))))))...
..
SIMILARITIES| miRBase tcc-MIR156g: 2e-17 PMRD ptc-miR156c: 0.0000000000003 microPC miR156: 2e-39 | UniProt no hits RFAM mir-156: 0.0000000000004 | most similar mature miRNAs |
Identical with: miR156 from microPC (MNEST044988) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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