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ABOUT THIS RECORD

ID: MNEST007654
species: Anolis carolinensis
miRNA family: mir-29
source: miRNEST

Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGCACCATTTGAAATCAGT

miRNA*
TGGTTTCACATGGTGGCTTAGA

mismatches: 1
bulges: 2

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pre-miRNA
TCCTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTTTTCCATCTTTGTATCTAGCACCATTTGAAATCAGTGTTCTAGGA

dot-bracket secondary structure
((((..(((.((((((((((.((((((..((((((..............)))))))))))).)))))))))).))).))))


SIMILARITIES
miRBase eca-mir-29b-2: 1e-36

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-29: 6e-27
most similar mature miRNAs

Identical with: cfa-mir-29b-2 from miRBase (MNEST026650)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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