miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST007660
species: Anolis carolinensis
miRNA family: mir-450
source: miRNEST

Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCTGCATTATGTTCCTGAAT

miRNA*
TTAGGAAAAATGTAAAACT

mismatches: 3
bulges: 2

View larger
pre-miRNA
AGTGCCAGCATTCTCAGTAGAGTTAGGAAAAATGTAAAACTTGATATATCCATTACTGAAAAATGAAGTCTGAGATGTTTGTGTTTGTGAAAAGGAATCT
AGTAAAAATTATTACTCTTAAACTGAATGAATTAGCTTTCTCCCTCTTTTGTGCATGGATACTTAACCTATTTCTGCATTATGTTCCTGAATCTTGCTGA
ACATACCCTTG


dot-bracket secondary structure
.((....))....((((((((.(((((((.((((((.((.((((..((((((((((........((((...((((.(((...((((((....((......
(((((......)))))......))..)))))).)))..))))...)))).))).))))))).)))).....)).))))))...))))))).)).))))))
...........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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