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ABOUT THIS RECORD

ID: MNEST007663
species: Anolis carolinensis
miRNA family: miR-1
source: miRNEST

Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACATACTTCTTTACATTCCA

miRNA*
GGTACATAAAGAAGTATGTGCT

mismatches: 3
bulges: 1

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pre-miRNA
CCTATCAAAAATACATACTTCTTTACATTCCATAACATTGTATCTTCATATGGGTACATAAAGAAGTATGTGCTCTCAACAG

dot-bracket secondary structure
...........((((((((((((((...((((((..............))))))....))))))))))))))..........


SIMILARITIES
miRBase gga-mir-1a-2: 5e-30

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-1: 4e-37
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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