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ABOUT THIS RECORD
ID:
MNEST008317
species:
Vitis vinifera
miRNA family:
MIR3631
source:
miRNEST
Taxonomy by NCBI:
Vitis vinifera
Vitis
Vitaceae
Vitales
rosids incertae sedis
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTGTTGACATCATCCAATAT
miRNA*
ATTGAATTATGTCAATAGGTT
mismatches:
2
bulges:
0
View larger
pre-miRNA
GCTTTTAATTAAAATGATGTTTGTTTTTTGTTGAATAAAAAATGTCAAAATATTTGATTTTTTCTATTAAACTAAAAGTAA
CTTGTTGACATCATCCAAT
AT
AATTAAAGTGAACTTGTTATCAATAAGTTGAGTTTAGTTAT
ATTGAATTATGTCAATAGGTT
ACTTTTAACTGAATAAAAAAAAGTCAAATATTTTGA
TATTTTTTATTCAGTTAAAAAATAAACATCATCTAAAACTAA
dot-bracket secondary structure
.............(((((((((((((((((.((((((((((((((((((((((((((((((((.((((....(((((((((
(((((((((((.((.((((
((
(((((((...((((((((...))))))))...)))))))))
)))).)).)))))))))))))
)))))))....))))..)))))))))))))))))))
)))))))))))))..)))))))))))))))))..........
SIMILARITIES
miRBase
vvi-MIR3631c
:
3e-31
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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