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ABOUT THIS RECORD

ID: MNEST008331
species: Vitis vinifera
miRNA family: MIR482
source: miRNEST

Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTTCCTACTCCTCCCATTCC

miRNA*
 AATTGGAGAGTAGGAAAGCTT

mismatches: 2
bulges: 1
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pre-miRNA
 GGTGTGAATGTGAAGTCTTTTGATTCCTGCGATTATTTGGGAATTGGAGAGTAGGAAAGCTTAGCCATCTATTTCCTTCATGGTTTCCTCTCCATGGATT
GGGGTCTAGAGCTATGTCTTTCCTACTCCTCCCATTCCTATTGTTTTCGGGGATTTCCGCTTCTCTTCTCTTAACA

dot-bracket secondary structure
((...(((...(((((.....((((((((.((.((..(((((((.(((((((((((((((.((((..((((..((((((((((........))))))...
))))..)))))))).).)))))))))).)))).))))))).)).)).))))))))...)))))..))).)).....


SIMILARITIES
miRBase vvi-MIR482: 4e-48

PMRD vvi-miR482: 4e-48

microPC miR482: 0.000009		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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deep sequencing data evidence




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