ABOUT THIS RECORDspecies: Vitis vinifera
miRNA family: MIR482
source: miRNEST
Taxonomy by NCBI:
Vitis vinifera Vitis Vitaceae Vitales rosids incertae sedis rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTTTCCTACTCCTCCCATTCC miRNA* AATTGGAGAGTAGGAATTCTT mismatches: 4 bulges: 1 |
pre-miRNA
TGTTTCCTGAGAATATTTGGGAATTGGAGAGTAGGAATTCTTAGCCATCTATTTCCTTCATGGTTTCCTCTCCATGGATTGGGGTCTAGAGCTAGTCTTT
CCTACTCCTCCCATTCCTATTGTTTTCGGGGATTT
dot-bracket secondary structure
...((((((((((((..(((((((.((((((((((((...(((((..((((..((((((((((........))))))...))))..)))))))))...))
)))))).)))).))))))).))))))))))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
TGTTTCCTGAGAATATTTGGGAATTGGAGAGTAGGAATTCTTAGCCATCTATTTCCTTCATGGTTTCCTCTCCATGGATTGGGGTCTAGAGCTAGTCTTT
CCTACTCCTCCCATTCCTATTGTTTTCGGGGATTT
dot-bracket secondary structure
...((((((((((((..(((((((.((((((((((((...(((((..((((..((((((((((........))))))...))))..)))))))))...))
)))))).)))).))))))).))))))))))))...
SIMILARITIES| miRBase vvi-MIR482: 1e-47 PMRD vvi-miR482: 1e-47 microPC miR482: 0.000002 | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
deep sequencing data evidence
