miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST008348
species:
Medicago truncatula
miRNA family:
MIR2652
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATGCAAGGTGCATAAGGATT
miRNA*
TCCTTATGCAGGGTGCTGGAAA
mismatches:
5
bulges:
1
View larger
pre-miRNA
CTTTTATGCAGGGTGCTGGAAA
TCCTTATGCAGGGTGCTGGAAA
TCATTACGTACATCGAATGGTTTTGGAGTACAACTCATAGAAACAATTTTTGGATT
TATGCAAGGTGCATAAGGATT
TCATTATGCACCATAACTG
dot-bracket secondary structure
...........(((((..((((
((((((((((...(((...(((
((............((((.(((((.((((...))))...))))).))))...))))
)..)))...))))))))))))
)).....))))).......
SIMILARITIES
miRBase
mtr-MIR2652a
:
3e-54
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record