miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST008352
species: Medicago truncatula
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATGGGACGGAGGGAGTAATA

miRNA*
ATATTCTCTCCGTCCCATAAT

mismatches: 2
bulges: 0

View larger
pre-miRNA
CTCATTANCGTAATATTCTCTCCGTCCCATAATANCTGAGTCATTTACAAAAAAATATTGTTCTAGAAAAATTGACTCATTTCATTTTTCAATACAATAT
TAATTACTTTTTTCCAATTATAACATTAATTAATACCACTTTCACCACTCCCAATTCAATATATTATACTTTGCAGTTATGATAAAGAAGAATACACCAA
CAATTTTTTGACAAAAGAATACACCAATAGTTGACAAGGGTACTCAAACCCATTTTTTTCTCTCTCTTTCACTTATACACTTTTTCTTAATAAGTATGAA
ATGAGTCAAAGGCCCCGTTAAAATGGGACGGAGGGAGTAATATATATCACT


dot-bracket secondary structure
.....((..(((.(((((((((((((((((..((..((.(((.((.((((.......))))...)).....((((((((((((((((.((((...(((..
........((((((..((((((((..(((.(((((..........................)))))....)))..))))))))...))))))........
..)))..)))).))).(((.........((..((.((((((......)))).)).))..))......)))((((((.............)))))).))))
))))))))).)))..)).))..))))))))))))))))).))).)).....



SIMILARITIES
miRBase osa-MIR812h: 0.00007

PMRD osa-miR812h: 0.00007

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record





Liczniki na strone;