ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIRf469
source: miRNEST
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCTGTAATCCCAGCACTCTGG miRNA* AAATTGCTGGGATTACAAGCA mismatches: 5 bulges: 0 |
pre-miRNA
AATANACCCACGTCGTCCTCCCAAATTGCTGGGATTACAAGCATGAGCCACTGTGCCTGGCATAAAGTGAATTCTTAATCATCCTTGAAAAGAAAANGGC
AGGNCAGGTGTGGCTCTCACCTGTAATCCCAGCACTCTGGGAGGCTGANTTGGAAGGAT
dot-bracket secondary structure
.......(((..(((.(((((((...(((((((((((((.....(((((((..((((((.(..........(((((..(((....))).)))))....))
))).))...))))))).....)))))))))))))...))))))).)))..)))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
AATANACCCACGTCGTCCTCCCAAATTGCTGGGATTACAAGCATGAGCCACTGTGCCTGGCATAAAGTGAATTCTTAATCATCCTTGAAAAGAAAANGGC
AGGNCAGGTGTGGCTCTCACCTGTAATCCCAGCACTCTGGGAGGCTGANTTGGAAGGAT
dot-bracket secondary structure
.......(((..(((.(((((((...(((((((((((((.....(((((((..((((((.(..........(((((..(((....))).)))))....))
))).))...))))))).....)))))))))))))...))))))).)))..)))......
SIMILARITIES| miRBase hsa-mir-619: 0.000000002 PMRD ptc-miRf10804-akr: 0.000000008 microPC no hits | UniProt no hits RFAM Metazoa_SRP: 0.000000000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
