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ABOUT THIS RECORD

ID: MNEST008381
species: Medicago truncatula
miRNA family: miR166m
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAATGTTGGCTGGCTCGAGG

miRNA*
TCGGACCAGGCTTCATTCCCC

mismatches: 2
bulges: 2

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pre-miRNA
TGTCTGTCTTCTTATTTGAGGGGAATGTTGGCTGGCTCGAGGCTTTTCAGTTTCACAAAGGAAGTTCAGTCTTAATTGTATGAACTATAAGGCTTCGGAC
CAGGCTTCATTCCCC
TCAAAATCTTAATTGTTT


dot-bracket secondary structure
..............(((((((((((((..((((((.((((((((((..(((((.((((((((.......))))..))))..)))))..)))))))))).)
)).))).))))))))
))))).............



SIMILARITIES
miRBase mtr-MIR166e: 2e-55

PMRD mtr-miR166b: 2e-49

microPC miR166: 1e-50
UniProt no hits

RFAM mir-166: 3e-54
most similar mature miRNAs

Identical with: miR166 from microPC (MNEST046081)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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