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ABOUT THIS RECORD

ID: MNEST008400
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCCGTCCCGAAATATAAGCA

miRNA*
TTTAGGTNTTGGGAAGGAAAG

mismatches: 4
bulges: 0

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pre-miRNA
GAGAGTGNGTGTTTAGGTNTTGGGAAGGAAAGGGGTAATCGAGTAATTCCAGATAAAGAAAAAAAAAGTGGAGGGCATCATTGTCCAGTGATAAGGCTGA
CAAAATAGATCAAAATGTATACAATATTTGTATTGTCTAAATGTGTACTTTTGAAAAAAATTGTAAGCTCAATCGAGTCTAAAAATATACTTTTAAAGGT
TTTCTTAGAAATGTGAACACAAATTATTATTGGAATATTTTCAGTCAAGTCTCATAAAACATCTATATGTACTCCCTCCGTCCCGAAATATAAGCAAAAA
AAAC


dot-bracket secondary structure
.........((((((.((.((((((.(((..((((((..((.(((..((((.................))))(((((....))))).((.((.(((((((
(((((((..((((((((((.((((((....)))))).))..(((((((((((((((...(((.((.((((....)))).))..)))....))))))))))
..((.((....)).)))))))...)))).))))..))))))..))).))))).))...))...))).)))))))).))).)))))).)).))))))....
....



SIMILARITIES
miRBase osa-MIR1862a: 0.00006

PMRD osa-miRf10322-akr: 0.0000003

microPC miR1439: 0.0002
UniProt no hits

RFAM MIR1122: 0.000005
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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