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ABOUT THIS RECORD

ID: MNEST008410
species: Medicago truncatula
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGCTGCTTAGCTATGGGTCCC

miRNA*
CTTCCATATCTAGGGAGCCTT

mismatches: 5
bulges: 0

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pre-miRNA
TTGATGTTAGGGTTTAAAGGGGTGGAGCTTCCTTTAGTCCAAATATGGATCTTGCTATGTTGATAGAGCTGCTTAGCTATGGGTCCCTCAACTCTACCCA
TCTTGTTCTTTGTGGTAGTTTTGTGGCTTCCATATCTAGGGAGCCTTATCACCTTTAGTTTAATCTTTCTTTGGATTGAAGGGAGCTCTACATCTTGCTC
TCTTACTTTA


dot-bracket secondary structure
..((.((.((((....((((.((((((((((((((((((((((...((((...((((...((((((.(((.(((((.((((((..((.(((..(((((((
..........)).)))))..))).))..)))))).))))).))).))))))....))))...))))...)))))))))))))))))))))).))))...)
))).)).)).



SIMILARITIES
miRBase mtr-MIR159a: 4e-101

PMRD mtr-miR159a: 3e-92

microPC miR159: 3e-92
UniProt no hits

RFAM MIR159: 0.00000001
most similar mature miRNAs

Identical with: miR159 from microPC (MNEST045638)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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