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ABOUT THIS RECORD

ID: MNEST008411
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTCTACTCCCTCCGTCCTAA

miRNA*
GGGACGGAGGGAGTAATATA

mismatches: 0
bulges: 1

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pre-miRNA
ATAAAAGTTGTGTCTACTCCCTCCGTCCTAAATTGTATGACGTTTTGAGCATTTCACACATATTAAGAAATGCAATTAATATTGTATGGAAAAAAGATAT
TATGAGTTGTTTTACAAAATTGTCCTTAATAAATAACATGAGAAAGATAAATGAAAGAATTGAAAGAAAAGATAGTAATAAATAGTTAAGGTTATAATAG
AAAAAATAACATTAATGTTGCATTGGTATTGTAAAACGACATATAATTTGGGACATTTTTTTTCTTCCTAAAGCGACATACAATTTGGGACGGAGGGAGT
AATATA
TTAGGAT


dot-bracket secondary structure
........(((((.(((((((((((((((((((((((((.(((((((.(((((((...........)))))))...((......)).(((((((((((((
((((.((((((((((((.((((((.((........................................)).))))))...((...(((((.(((((.....
.....))))).))))).))((....)).)))))))))))).)))))).......)))))))))))...))))))).))))))))))))))))))))))))
))))))
.......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC miR1436: 0.00002
UniProt no hits

RFAM MIR1122: 0.0003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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