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ABOUT THIS RECORD

ID: MNEST008412
species: Medicago truncatula
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTTGGGACGGAGGGAGTAAT

miRNA*
 CTACTCCCTCCGTCCTAAATTG

mismatches: 0
bulges: 1
View larger
pre-miRNA
 TAAAAGTTGTGTCTACTCCCTCCGTCCTAAATTGTATGACGTTTTGAGCATTTCACACATATTAAGAAATGCAATTAATATTGTATGGAAAAAAGATATT
ATGAGTTGTTTTACAAAATTGTCCTTAATAAATAACATGAGAAAGATAAATGAAAGAATTGAAAGAAAAGATAGTAATAAATAGTTAAGGTTATAATAGA
AAAAATAACATTAATGTTGCATTGGTATTGTAAAACGACATATAATTTGGGACATTTTTTTTCTTCCTAAAGCGACATACAATTTGGGACGGAGGGAGTA
ATATATTAGGA

dot-bracket secondary structure
.......(((((.(((((((((((((((((((((((((.(((((((.(((((((...........)))))))...((......)).((((((((((((((
(((.((((((((((((.((((((.((........................................)).))))))...((...(((((.(((((......
....))))).))))).))((....)).)))))))))))).)))))).......)))))))))))...))))))).)))))))))))))))))))))))))
)))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC miR1436: 0.00002		UniProt no hits

RFAM MIR1122: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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