ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIRf94
source: miRNEST
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAAGATGCTTGGGTTTTGGA miRNA* CGTTGCTACAAGCATGTTGAGA mismatches: 3 bulges: 1 |
pre-miRNA
ACAATCCCACTTCGTTGCTACAAGCATGTTGAGAATTACATGATTGGTGGACAATACGAGCATGACATGAACCTCATCGTGGATGAAATTATGTTTTATG
CATCTCAGATTACTCTTTCTACTTCTACTACTACTACTACTCATCAAGATGCTTGGGTTTTGGACGTGGACGA
dot-bracket secondary structure
......((((((((..(((.(((((((.((((............(((((((......(((((((((((((...(((((...)))))..)))))))..)))
).))..(((........)))...))))))).............)))).))))))))))..)))).))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
ACAATCCCACTTCGTTGCTACAAGCATGTTGAGAATTACATGATTGGTGGACAATACGAGCATGACATGAACCTCATCGTGGATGAAATTATGTTTTATG
CATCTCAGATTACTCTTTCTACTTCTACTACTACTACTACTCATCAAGATGCTTGGGTTTTGGACGTGGACGA
dot-bracket secondary structure
......((((((((..(((.(((((((.((((............(((((((......(((((((((((((...(((((...)))))..)))))))..)))
).))..(((........)))...))))))).............)))).))))))))))..)))).))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
