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ABOUT THIS RECORD

ID: MNEST008450
species: Sorghum bicolor
miRNA family: MIR2011
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCAGTGGCATATGCAAGTCT

miRNA*
GCTGGCAATGTCTGTGTAGC

mismatches: 4
bulges: 1

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pre-miRNA
TGGAAAGGGCAAGCTGGCAATGTCTGTGTAGCATCTTTCGATTGGAGCTGCAGTGGCATATGCAAGTCTGCTGAGAGG

dot-bracket secondary structure
.......((((.(((.((((((((..((((((.(((.......)))))))))..))))).))).))).))))......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q8LEJ9|B3GT4_ARATH: 0.00000003

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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