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ABOUT THIS RECORD
ID:
MNEST008450
species:
Sorghum bicolor
miRNA family:
MIR2011
source:
miRNEST
Taxonomy by NCBI:
Sorghum bicolor
Sorghum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCAGTGGCATATGCAAGTCT
miRNA*
GCTGGCAATGTCTGTGTAGC
mismatches:
4
bulges:
1
View larger
pre-miRNA
TGGAAAGGGCAA
GCTGGCAATGTCTGTGTAGC
ATCTTTCGATTGGAGC
TGCAGTGGCATATGCAAGTCT
GCTGAGAGG
dot-bracket secondary structure
.......((((.
(((.((((((((..((((((
.(((.......)))))
))))..))))).))).))).)
)))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q8LEJ9|B3GT4_ARATH: 0.00000003
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record