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ABOUT THIS RECORD

ID: MNEST008451
species: Sorghum bicolor
miRNA family: MIR812
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGAATAAGACGAGTGGTCAA

miRNA*
GACCACTCGTCTTATTCAAAG

mismatches: 0
bulges: 0

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pre-miRNA
CCATGTACCATAATAGGGTACTCAATCCATCCCAAATTGTAAGTCGTTTGACTTTTTTAATATCAAGTTTGACCACTCGTCTTATTCAAAGTTTTGTATA
AAATATCACTTTTTTTTTGTTGTGTATTGGTTTATTAATAAAAGTTCTTCAAGAATAACTTAAATTTGACTATATTTGCACAAATTTTTTGAATAAGACG
AGTGGTCAA
ACTTGGTGTAAAAAAAGTCAAACGACTTACAATTTGGGATGGAGGGAGTACTACTGTACCATCTTTTTT


dot-bracket secondary structure
............(((((((((((..(((((((((((((((((((((((((((((((((.((((((((((((((((((((((((((((((((.(((((...
((((((.......(((..(((((...((((...(((......)))...))))..)))))..))).......))))))..)))))..))))))))))))))
)))))))))
))))))))).)))))))))))))))))))))))))))))))))..))))))).))))............



SIMILARITIES
miRBase osa-MIR818e: 0.00000000002

PMRD osa-miRf10207-akr: 0.00000000002

microPC miR806: 0.0000002
UniProt no hits

RFAM MIR806: 7e-79
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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