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ABOUT THIS RECORD

ID: MNEST008452
species: Sorghum bicolor
miRNA family: MIR812
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGAATAAGACGAGTGGTCAA

miRNA*
GACCACTCGTCTTATTCAAAG

mismatches: 0
bulges: 0

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pre-miRNA
TTTTTTAATATCAAGTTTGACCACTCGTCTTATTCAAAGTTTTGTACAAAATATCACTTTTTTTTGTTGTGTATTGGTTTATTAATAAAAATTCTTCAAG
AATGACTTAAAATTTGACTATATTTGCACAAATTTTTTGAATAAGACGAGTGGTCAAACTTGAGGTAAAAAAGTCA


dot-bracket secondary structure
(((((((...(((((((((((((((((((((((((((((.(((((.((((((((((..((((...(((((...((((...(((......)))...)))).
.)))))..))))..))).))).)))).)))))..)))))))))))))))))))))))))))))..)))))))....



SIMILARITIES
miRBase osa-MIR818e: 0.00000000001

PMRD osa-miRf10207-akr: 0.00000000001

microPC miR806: 0.0000001
UniProt no hits

RFAM MIR812: 3e-64
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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