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ABOUT THIS RECORD
ID:
MNEST008452
species:
Sorghum bicolor
miRNA family:
MIR812
source:
miRNEST
Taxonomy by NCBI:
Sorghum bicolor
Sorghum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGAATAAGACGAGTGGTCAA
miRNA*
GACCACTCGTCTTATTCAAAG
mismatches:
0
bulges:
0
View larger
pre-miRNA
TTTTTTAATATCAAGTTT
GACCACTCGTCTTATTCAAAG
TTTTGTACAAAATATCACTTTTTTTTGTTGTGTATTGGTTTATTAATAAAAATTCTTCAAG
AATGACTTAAAATTTGACTATATTTGCACAAATTTT
TTGAATAAGACGAGTGGTCAA
ACTTGAGGTAAAAAAGTCA
dot-bracket secondary structure
(((((((...((((((((
(((((((((((((((((((((
.(((((.((((((((((..((((...(((((...((((...(((......)))...)))).
.)))))..))))..))).))).)))).)))))..))
)))))))))))))))))))))
))))))..)))))))....
SIMILARITIES
miRBase
osa-MIR818e
:
0.00000000001
PMRD
osa-miRf10207-akr
:
0.00000000001
microPC
miR806
:
0.0000001
UniProt
no hits
RFAM
MIR812: 3e-64
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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