ABOUT THIS RECORDspecies: Sorghum bicolor
miRNA family: MIR2914
source: miRNEST
Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATGGTGGTGACGGGTGACGG miRNA* GTAACCTCTCGCTTCCGCAAT mismatches: 5 bulges: 0 |
pre-miRNA
TAGGGGCCTACCATGGTGGTGACGGGTGACGGAATCGTGCATTACTCTAACTATCATGATGGTACGATCCCGTAACCTCTCGCTTCCGCAATTCTAGCCC
dot-bracket secondary structure
...((((......(((.(((((.((((.((((.(((((((.....................))))))).)))).)))).))))).)))........))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TAGGGGCCTACCATGGTGGTGACGGGTGACGGAATCGTGCATTACTCTAACTATCATGATGGTACGATCCCGTAACCTCTCGCTTCCGCAATTCTAGCCC
dot-bracket secondary structure
...((((......(((.(((((.((((.((((.(((((((.....................))))))).)))).)))).))))).)))........))))
SIMILARITIES| miRBase no hits PMRD peu-miR2914: 0.000000001 microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 0.00000000009 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
