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ABOUT THIS RECORD

ID: MNEST008519
species: Chlamydomonas reinhardtii
miRNA family: MIRf311
source: miRNEST

Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGGTATCAGGTGTCAGGTAT

miRNA*
CTTGCGCCTAGACCAGAC

mismatches: 4
bulges: 2

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pre-miRNA
GCATTGTGTTGAGCTTGCGCCTAGACCAGACGACCACTCAGGACGGTGTAAGAAGGCTAGCGCGATCAGGTATCAGGTGTCAGGTATCAGGTGTGGG

dot-bracket secondary structure
(((...)))....(((((((((..(((.(((.((((((...((..((((.((....)).))))..)).)))....)))))).)))...)))))))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_bacteria: 0.0003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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