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ABOUT THIS RECORD
ID:
MNEST008519
species:
Chlamydomonas reinhardtii
miRNA family:
MIRf311
source:
miRNEST
Taxonomy by NCBI:
Chlamydomonas reinhardtii
Chlamydomonas
Chlamydomonadaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGGTATCAGGTGTCAGGTAT
miRNA*
CTTGCGCCTAGACCAGAC
mismatches:
4
bulges:
2
View larger
pre-miRNA
GCATTGTGTTGAG
CTTGCGCCTAGACCAGAC
GACCACTCAGGACGGTGTAAGAAGGCTAGCGCGAT
CAGGTATCAGGTGTCAGGTAT
CAGGTGTGGG
dot-bracket secondary structure
(((...)))....
(((((((((..(((.(((
.((((((...((..((((.((....)).))))..)
).)))....)))))).)))..
.)))))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
SSU_rRNA_bacteria: 0.0003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record