ABOUT THIS RECORDspecies: Chlamydomonas reinhardtii
miRNA family: MIRf311
source: miRNEST
Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGGTATCAGGTGTCAGGTAT miRNA* CTTGCGCCTAGACCAGAC mismatches: 4 bulges: 2 |
pre-miRNA
GCATTGTGTTGAGCTTGCGCCTAGACCAGACGACCACTCAGGACGGTGTAAGAAGGCTAGCGCGATCAGGTATCAGGTGTCAGGTATCAGGTGTGGG
dot-bracket secondary structure
(((...)))....(((((((((..(((.(((.((((((...((..((((.((....)).))))..)).)))....)))))).)))...)))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GCATTGTGTTGAGCTTGCGCCTAGACCAGACGACCACTCAGGACGGTGTAAGAAGGCTAGCGCGATCAGGTATCAGGTGTCAGGTATCAGGTGTGGG
dot-bracket secondary structure
(((...)))....(((((((((..(((.(((.((((((...((..((((.((....)).))))..)).)))....)))))).)))...)))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_bacteria: 0.0003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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