ABOUT THIS RECORDspecies: Schistosoma japonicum
miRNA family: miR-4111
source: miRNEST
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTTGATTATTTTGTTTGTCA miRNA* ATAAATACAATAAACAAACAG mismatches: 4 bulges: 0 |
pre-miRNA
ATTAATAGAAAATTTGATTATTTTGTTTGTCAACATGAAAATGGATAAATACAATAAACAAACAGGGAAAACT
dot-bracket secondary structure
............((((.(((((.((((((((..(((....))))))))))).))))).))))...........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATTAATAGAAAATTTGATTATTTTGTTTGTCAACATGAAAATGGATAAATACAATAAACAAACAGGGAAAACT
dot-bracket secondary structure
............((((.(((((.((((((((..(((....))))))))))).))))).))))...........
SIMILARITIES| miRBase cin-mir-4111: 0.0008 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
