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ABOUT THIS RECORD

ID: MNEST008811
species: Taeniopygia guttata
miRNA family: miR-2954
source: miRNEST

Taxonomy by NCBI:
Taeniopygia guttata Taeniopygia Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTGAGAGGGCTTGGGGAGAG

miRNA*
TCCCCATTCCACTCCTAGCAG

mismatches: 5
bulges: 1

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pre-miRNA
TGAGTCTGGGCTTGGAGCAGTGCTGAGAGGGCTTGGGGAGAGGATTGTAGTGGAGCTCCATCCCCATTCCACTCCTAGCAGCTCTCTGGCCATCCACCT

dot-bracket secondary structure
........((((.(((((..(((((.(((((..((((((..(((..((......))))).))))))..)).))).))))))))))..))))........


SIMILARITIES
miRBase tgu-mir-2954: 3e-35

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: gga-mir-2954 from miRBase (MNEST026354)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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