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ABOUT THIS RECORD

ID: MNEST008827
species: Populus trichocarpa
miRNA family: MIR1134
source: miRNEST

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAACAAAAACAAGAAGAAGAA

miRNA*
TTTTTTTTTTTTTTTGATCAA

mismatches: 4
bulges: 0

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pre-miRNA
TTTTTTTTTTTTTTTTTTGATCAATCGAATACCAGATGTATTATTTCCCCATGAAGCAAAGAGCGAGGGTTATAAAAACAAAAACAAGAAGAAGAAAAAA
ATACT


dot-bracket secondary structure
((((((((((((.((((((.((....)).(((.....)))((((..(((......((.....))..)))..))))...)))))).))))))))))))...
.....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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