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ABOUT THIS RECORD

ID: MNEST008838
species: Populus trichocarpa
miRNA family: MIRf126
source: miRNEST

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATTCTTACAGTGGCCATTGA

miRNA*
AATACCCATTCTAAGAGGTGG

mismatches: 5
bulges: 0

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pre-miRNA
TTTTTTGCTATCAATACCCATTCTAAGAGGTGGTATATGGCTAAGCAGCCGACCCAACAACACATATTGTCTGAAATTCTTACAGTGGCCATTGATAATA
ATTG


dot-bracket secondary structure
....(((.(((((((..(((((.((((((.((((....((((....)))).)))..((((......))))..)...)))))).)))))..))))))).))
)...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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