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ABOUT THIS RECORD

ID: MNEST008917
species: Phaseolus vulgaris
miRNA family: miR166d
source: miRNEST

Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAATGTTGTCTGGCTCGAGG

miRNA*
 TCGGACCAGGCTTCATTCCCC

mismatches: 3
bulges: 0
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pre-miRNA
 TGAGGTTGAGAGGAATGTTGTCTGGCTCGAGGTCATGGAGGAGGAGAGTTCTCAGATAAACTCTTTCACCCAAAGTTTCCAATGGAAATTTACCCTCTAA
CACCAAAATGATTCTCGGACCAGGCTTCATTCCCCCCACCCAA

dot-bracket secondary structure
...((.((...((((((..((((((.(((((((((((((((.((((((((........))))))))......((((((((...))))))))..)))))..
.......)))).)))))).))))))..))))))...)).))..


SIMILARITIES
miRBase pvu-MIR166a: 2e-77

PMRD pvu-miR166: 7e-77

microPC miR166: 6e-65		UniProt no hits

RFAM mir-166: 0.00000000000004		most similar mature miRNAs

Identical with: miR166 from microPC (MNEST046743)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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