ABOUT THIS RECORDspecies: Ricinus communis
miRNA family: miR529
source: miRNEST
Taxonomy by NCBI:
Ricinus communis Ricinus Acalypheae Acalyphoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTGTACTCTCTCTCTTCTTC miRNA* AGAATAGTAGAGAGTGTGAAA mismatches: 3 bulges: 2 |
pre-miRNA
AGCTAAGGTAGTAGAATAGTAGAGAGTGTGAAAGCAATGATTGCAGAAAACCAAAAGAGAAGGGGAGCCAGAGTGTTCTTTATTCGCCCTTTTACACTTT
ACTTGCACAAGCAGCGCCTGCCCTTCTAATCTACACCCACTGCTATTTCTGTACTCTCTCTCTTCTTCTCCAATCAA
dot-bracket secondary structure
......((.((.((((.((.((((((((.(((((((.((..((.(((..........(((((((..((.(((((((.................)))))))
..((((....)))).))...)))))))..))).))..)).))))..)))..)))))))))).)))).))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGCTAAGGTAGTAGAATAGTAGAGAGTGTGAAAGCAATGATTGCAGAAAACCAAAAGAGAAGGGGAGCCAGAGTGTTCTTTATTCGCCCTTTTACACTTT
ACTTGCACAAGCAGCGCCTGCCCTTCTAATCTACACCCACTGCTATTTCTGTACTCTCTCTCTTCTTCTCCAATCAA
dot-bracket secondary structure
......((.((.((((.((.((((((((.(((((((.((..((.(((..........(((((((..((.(((((((.................)))))))
..((((....)))).))...)))))))..))).))..)).))))..)))..)))))))))).)))).))))......
SIMILARITIES| miRBase osa-MIR529a: 0.0005 PMRD osa-miR529a: 0.0005 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
