ABOUT THIS RECORDspecies: Ipomoea nil
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA NGAAGCTGCCACATGATCTGA miRNA* AGATCANGCTGGCAGCTTCAAC mismatches: 3 bulges: 1 |
pre-miRNA
CAACCAACAGGNGAAGCTGCCACATGATCTGATCTTTCCTCAACCCAAAAAAGGAGGCAAGTTTAGATCANGCTGGCAGCTTCAACTGCTAGAG
dot-bracket secondary structure
.......(((..((((((((((..((((((((.(((.((((............)))).))).))))))))...))))))))))..)))......
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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CAACCAACAGGNGAAGCTGCCACATGATCTGATCTTTCCTCAACCCAAAAAAGGAGGCAAGTTTAGATCANGCTGGCAGCTTCAACTGCTAGAG
dot-bracket secondary structure
.......(((..((((((((((..((((((((.(((.((((............)))).))).))))))))...))))))))))..)))......
SIMILARITIES| miRBase sly-MIR167: 0.00000000007 PMRD sly-miR167: 0.00000000007 microPC miR167: 0.000000005 | UniProt no hits RFAM MIR167_1: 0.000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
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