ABOUT THIS RECORDspecies: Heterorhabditis bacteriophora
miRNA family: miR-2476
source: miRNEST
Taxonomy by NCBI:
Heterorhabditis bacteriophora Heterorhabditis Heterorhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGTTGTGGTCTAGTGGTTAGG miRNA* AGCCTCTTAACCACAACTAT mismatches: 4 bulges: 1 |
pre-miRNA
GAATTTAAGTCCAGCCTCTTAACCACAACTATTTACCGCTATTGTGGTCGCAGCTTAATTACTCACAGAAATCTCTTCCCTCTGTGTAGCCGCACCCGTA
GTCCGTTGTGGTCTAGTGGTTAGGATTTACGGC
dot-bracket secondary structure
.....(((((((((((.((..((((((((........(((((...(((.((.(((........((((((...........)))))).))).))))).)))
))..))))))))..)).)))).)))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GAATTTAAGTCCAGCCTCTTAACCACAACTATTTACCGCTATTGTGGTCGCAGCTTAATTACTCACAGAAATCTCTTCCCTCTGTGTAGCCGCACCCGTA
GTCCGTTGTGGTCTAGTGGTTAGGATTTACGGC
dot-bracket secondary structure
.....(((((((((((.((..((((((((........(((((...(((.((.(((........((((((...........)))))).))).))))).)))
))..))))))))..)).)))).)))))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM tRNA: 0.0000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
