ABOUT THIS RECORDspecies: Pongo abelii
miRNA family: miR-1587
source: miRNEST
Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTCTGGGCAGGGCTGGGCAG miRNA* GGAGCCGGGCCGCAGCTGGGGCTGG mismatches: 5 bulges: 1 |
pre-miRNA
GCCGGGGGAGGGCGGTGCGGTCGCGGCTGGCGGCAGAAGCGGCCGCAGGGGGTCTGGGCAGGGCTGGGCAGTGCTGCTGGAGCAAAAGCGGGAGCGGGAG
CCGGGCCGCAGCTGGGGCTGGAGACGCCGTCGCAGCCTGAACGGAGTGTGCGACGGATTGGGAGGTCG
dot-bracket secondary structure
(((.......)))..(((((((((..(((....)))..)))))))))...(((((.(((..((((.(((.((.(((((........)))))..))....)
)).))))...))).)))))...(((.((((((((.((.....))....))))))))........))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GCCGGGGGAGGGCGGTGCGGTCGCGGCTGGCGGCAGAAGCGGCCGCAGGGGGTCTGGGCAGGGCTGGGCAGTGCTGCTGGAGCAAAAGCGGGAGCGGGAG
CCGGGCCGCAGCTGGGGCTGGAGACGCCGTCGCAGCCTGAACGGAGTGTGCGACGGATTGGGAGGTCG
dot-bracket secondary structure
(((.......)))..(((((((((..(((....)))..)))))))))...(((((.(((..((((.(((.((.(((((........)))))..))....)
)).))))...))).)))))...(((.((((((((.((.....))....))))))))........))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
