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ABOUT THIS RECORD

ID: MNEST009147
species: Pongo abelii
miRNA family: mir-1273
source: miRNEST

Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGGCGACAGTGCAAGACTCTG

miRNA*
GAGCTTGCAGTGAGCCGAG

mismatches: 3
bulges: 2

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pre-miRNA
ACTCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGTGCAAGACTCTGTCTCAAAAA

dot-bracket secondary structure
......(((((((((((((((.((.(((.((...((((....))))......)).)))..)).)))))).))))))))).....


SIMILARITIES
miRBase ppy-mir-1273: 7e-17

PMRD ptc-miRf12524-akr: 0.001

microPC no hits
UniProt sp|Q8WTZ3|YS049_HUMAN: 0.0003

RFAM Metazoa_SRP: 2e-26
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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