miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST009208
species:
Penaeus monodon
miRNA family:
miR-669n
source:
miRNEST
Taxonomy by NCBI:
Penaeus monodon
Penaeus
Penaeidae
Penaeoidea
Dendrobranchiata
Decapoda
Eucarida
Eumalacostraca
Malacostraca
Crustacea
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTTGTGTGTGTGTGTGTGTG
miRNA*
CGCACAATACACGCGTAAGA
mismatches:
4
bulges:
1
View larger
pre-miRNA
CACTCAAGGCCTGCTCTCTAGA
CGCACAATACACGCGTAAGA
AGGAAGAATATAGTCTTGAAGTCGCTCTGTGTACTTGGTGTGTGTGTTTGTATGATTG
TTTGTTTCTGTGTGT
ATTTGTGTGTGTGTGTGTGTG
TGTGTTGTGTTGTGTTGGG
dot-bracket secondary structure
..(((((.((.(((....((.(
(((((((((((((((.....
.(((((...((((((.((((..(((.(((......)))...)))..))))...)))))
)...)))))......
...))))))))).))))))).
))....)))..)).)))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record