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ABOUT THIS RECORD

ID: MNEST009219
species: Ursus americanus
miRNA family: mir-1
source: miRNEST

Taxonomy by NCBI:
Ursus americanus Ursus Ursidae Caniformia Carnivora Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAATGTAAAGAAGTATGT

miRNA*
ATACTTCTTTATGTACCCATA

mismatches: 1
bulges: 1

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pre-miRNA
TTAGTAAAACCTACTCAGAGTACATACTTCTTTATGTACCCATATGAACATACAATGCTATGGAATGTAAAGAAGTATGTATTTTTGGTAGGCAATAAAC


dot-bracket secondary structure
.........((((((.(((((((((((((((((((((..(((((..............))))).))))))))))))))))))))).))))))........



SIMILARITIES
miRBase hsa-mir-1-2: 5e-43

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-1: 3e-32
most similar mature miRNAs

Identical with: ptr-mir-1-2 from miRBase (MNEST030138)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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