ABOUT THIS RECORDspecies: Nilaparvata lugens
miRNA family: mir-10
source: miRNEST
Taxonomy by NCBI:
Nilaparvata lugens Nilaparvata Delphacinae Delphacidae Fulgoroidea Archaeorrhyncha Neohemiptera Euhemiptera Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAAATTCGGTTCTAGAGAGGT miRNA* CCTGTAGATCCGAATTTGTT mismatches: 2 bulges: 1 |
pre-miRNA
TTTACATCTACCCTGTAGATCCGAATTTGTTTGACATAAGGCGACAAATTCGGTTCTAGAGAGGTTTGTGTGG
dot-bracket secondary structure
..(((((..(((((.((((.(((((((((((...........))))))))))).)))).)).)))..))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTACATCTACCCTGTAGATCCGAATTTGTTTGACATAAGGCGACAAATTCGGTTCTAGAGAGGTTTGTGTGG
dot-bracket secondary structure
..(((((..(((((.((((.(((((((((((...........))))))))))).)))).)).)))..))))).
SIMILARITIES| miRBase tca-mir-10: 3e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-10: 3e-28 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
